CyteGuide: Visual Guidance for Hierarchical Single-Cell Analysis

download paper prerprint pdf

Download the Paper

Thomas Höllt, Nicola Pezzotti, Vincent van Unen, Frits Koning, Boudewijn P.F. Lelieveldt, and Anna Vilanova. CyteGuide: Visual Guidance for Hierarchical Single-Cell Analysis. IEEE Transactions on Visualization and Computer Graphics (Proceedings of InfoVis 2017), 24(1), 2018. – bibtex

User Study Materials
download field study questionnaire pdf

Field Study

This files contains the questions asked during the field study to gather the requirements for the design of CyteGuide.


download user study tasks pdf

User Study Tasks

This file contains the tasks given during the user study to measure the performance with and without CyteGuide.


download raw timings csv

Raw Timings

This file contains the raw timings of the user study, including the removed timings for identification of high variance markers.


Interactive Demo

We provide an interactive demonstration of CyteGuide showing the results of the user study. The demo is tested in Chrome and Safari. It contains approximately 5MB of data, please be patient while it loads. Data from the different participants can be selected in the dropdown menu on the bottom.

For a brief overview of the features of the demo, please see the video below.

Open Interactive Demo